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Intron Name: Anas_platyrhynchos_platyrhynchos_10_14934092_14935165_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14934092 - 14935165

Intron Length:
1074

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAGGTGTG

5'SS Class:
major

3'SS Sequence:
CGTCTCTTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAC

U12 Branch Point Sequence:
GCCGGTGCATCT

Flanking Amino Acid:
CAWQLHGDHLELRYANTLMR

Intron Amino Acid Position:
61

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1.1
67.1
44.6

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
82.4
0.73
0.8
76.4
32.2

Minor 5ss
34.5
-1.8
3.5
39.9
46.1

Minor BPS
30
-1.4
2.2
39.38
42.5

Associated Gene:

Gene:
TMLHE

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14925632 - 14939201
13570

14925632 - 14939201
13570