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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15114310_15117286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15114310 - 15117286

Intron Length:

2977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

CTTCAGATGACT

Flanking Amino Acid:

ENNKLTYSHGNYLFHYICQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

71.6

40.2

Major BPS

74.1

0.6

38.9

Major PPT

88.6

0.87

0.6

Minor 5ss

32.2

-2

41.5

Minor BPS

42.9

-0.4

2.4

66.84

43.6

Associated Gene:

Gene:

VAMP7

Ensembl Gene ID:

ENSAPLG00000012771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013304

15114164 - 15124203

10040