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Intron Name: Anas_platyrhynchos_platyrhynchos_10_151268_151599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151268 - 151599

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TGGGCTATAAAA

Flanking Amino Acid:

FSTWLKLNKKVTAQDVRKES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

65.3

0.38

71.6

30.1

Major PPT

81.8

0.72

0.9

73.6

41.8

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

47.8

-0.1

1.8

58.11

41.3

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040558

142056 - 165018

22963

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209