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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15158075_15158611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15158075 - 15158611

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

CCCTGTCCAACC

Flanking Amino Acid:

NIYCHEYCFRCGICHKAMGD

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

78.4

0.64

0.9

32.5

Minor 5ss

33.4

-1.9

2.9

35.8

40.7

Minor BPS

40.3

-0.7

2.1

46.2

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045175

15155407 - 15186796

31390

ENSAPLT00000036016

15156876 - 15186796

29921

ENSAPLT00000025902

15157976 - 15185925

27950

ENSAPLT00000013431

15157976 - 15186796

28821