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Intron Name: Anas_platyrhynchos_platyrhynchos_10_151875_152306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151875 - 152306

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

CTGGTCTAAATC

Flanking Amino Acid:

YLASDKLLPQRVLEQHKLNK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

71.6

0.54

33.1

Major PPT

77.8

0.63

0.9

41.4

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

48.9

-0.1

1.8

56.54

43.3

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209

ENSAPLT00000040558

142056 - 165018

22963