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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15217631_15219657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15217631 - 15219657

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

TTTGTCAGAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.4

37.7

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

81.3

0.7

73.2

31.7

Minor 5ss

30.1

-2.3

2.6

34.1

41.4

Minor BPS

47.1

-0.1

73.51

43.1

Associated Gene:

Gene:

NSDHL

Ensembl Gene ID:

ENSAPLG00000013097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013641

15210384 - 15219708

9325