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Intron Name: Anas_platyrhynchos_platyrhynchos_10_152391_152742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152391 - 152742

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCATGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TCTTTTTGCATG

Flanking Amino Acid:

VWHEEHRGMIREDAVLEYLK

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

72.4

0.51

65.8

40.6

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

46.5

-0.4

1.9

54.72

41.7

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040558

142056 - 165018

22963

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209