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Intron Name: Anas_platyrhynchos_platyrhynchos_10_152890_153336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152890 - 153336

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGCTTTCTATTT

Flanking Amino Acid:

LGLNIYEQNDRLTPKIGFPW

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.6

0.71

0.8

77.4

31.2

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

46.7

-0.1

1.8

64.22

41.1

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209

ENSAPLT00000040558

142056 - 165018

22963

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994