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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15323112_15324250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15323112 - 15324250

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

GCGAGCTTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

88.7

0.87

0.6

84.7

22.9

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

49.8

-0.1

1.9

52.58

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044225

15322909 - 15350310

27402

ENSAPLT00000001231

15322909 - 15349977

27069