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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15338998_15343702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15338998 - 15343702

Intron Length:

4705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CTTCTCTTGATC

Flanking Amino Acid:

RQLSRHSSLPGSSWLSLPVP

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

83.8

0.84

73.6

41.8

Major PPT

89.8

0.89

0.7

89.4

26.6

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

65.5

0.47

1.2

70.29

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044225

15322909 - 15350310

27402

ENSAPLT00000031503

15323703 - 15349977

26275