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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15338998_15349480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15338998 - 15349480

Intron Length:

10483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TCTTGTGCATTT

Flanking Amino Acid:

RQLSRHSSLPARSDTGEPRQ

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

82.5

0.73

0.7

77.1

24.9

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

-0.8

2.4

58.89

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001231

15322909 - 15349977

27069