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Intron Name: Anas_platyrhynchos_platyrhynchos_10_153434_154521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

153434 - 154521

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTTTCCTTGTCC

Flanking Amino Acid:

VIKPIDKKAPDFVFYAPRLR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

70.2

40.5

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

64.9

0.34

63.1

37.4

Minor 5ss

34.3

-1.8

44.9

42.8

Minor BPS

56.1

0.17

3.5

85.91

32.5

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040558

142056 - 165018

22963

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209