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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15343826_15349480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15343826 - 15349480

Intron Length:

5655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TCTTGTGCATTT

Flanking Amino Acid:

LKTDAAEALPARSDTGEPRQ

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

82.5

0.73

0.7

77.1

24.9

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

-0.8

2.4

58.89

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044225

15322909 - 15350310

27402

ENSAPLT00000031503

15323703 - 15349977

26275