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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1535221_1540391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1535221 - 1540391

Intron Length:

5171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATATGCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTTTTTATAT

Flanking Amino Acid:

KAISGCFFQQMYSSLTSISM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

59.8

45.2

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

54.4

0.22

1.7

70.62

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001313

1535183 - 1541082

5900