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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15502639_15504542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15502639 - 15504542

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

TCTCATCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGCTCATTACAT

Flanking Amino Acid:

LKNIRETINQVTEAQVHQSS

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

73.9

0.59

30.2

Major PPT

80.8

0.69

0.8

77.5

30.9

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

49.9

0.07

71.29

Associated Gene:

Gene:

C8orf48

Ensembl Gene ID:

ENSAPLG00000020502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044421

15485674 - 15513390

27717

ENSAPLT00000041252

15479150 - 15513390

34241