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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15574763_15576420_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15574763 - 15576420

Intron Length:
1658

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGAATA

5'SS Class:
strong_major

3'SS Sequence:
TTTGAAACTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
TTTTTCCTACTT

Flanking Amino Acid:
PFYRTFKGFMVLIEKEWIAM

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.2
0.85
0.9
82.6
29.6

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
60.3
0.23
1.1
58.1
41.2

Minor 5ss
37.2
-1.4
3
46.4
43

Minor BPS
59.8
0.38
1.9
83.92
37.4

Associated Gene:

Gene:
MTMR8

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15561352 - 15581886
20535