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Intron Name: Anas_platyrhynchos_platyrhynchos_10_156696_157125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156696 - 157125

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TGTCTTACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

CATTCACTAACT

Flanking Amino Acid:

ESEAQEWQQKAQMVQEDLEK

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

80.2

0.68

0.9

74.4

35.1

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

0.36

79.54

41.8

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031998

87586 - 160925

73340

ENSAPLT00000017171

142056 - 167049

24994

ENSAPLT00000004362

132274 - 158602

26329

ENSAPLT00000043318

95717 - 160925

65209

ENSAPLT00000040558

142056 - 165018

22963