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Intron Name: Anas_platyrhynchos_platyrhynchos_10_158599_158724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158599 - 158724

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAACTCT

5'SS Class:

major

3'SS Sequence:

GTCTTATTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

ATGGTCTTATTT

Flanking Amino Acid:

TKQRIDEFESIVLGKCWSSA

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

67.7

38.2

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

78.5

0.64

0.8

36.5

Minor 5ss

48.3

-0.2

2.9

40.6

Minor BPS

0.2

1.7

69.18

42.7

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040558

142056 - 165018

22963

ENSAPLT00000017171

142056 - 167049

24994