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Intron Name: Anas_platyrhynchos_platyrhynchos_10_15902418_15913622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15902418 - 15913622

Intron Length:

11205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTTTGTTGATG

Flanking Amino Acid:

KNLTMQLVVTERPKIYEKET

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

90.5

0.91

0.7

28.1

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

51.5

-0.1

2.1

63.64

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037259

15840324 - 15965992

125669

ENSAPLT00000009682

15840324 - 15965992

125669

ENSAPLT00000039596

15840324 - 15967769

127446

ENSAPLT00000037747

15840324 - 15965992

125669