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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16065718_16072490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16065718 - 16072490

Intron Length:

6773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TTTGTTTTCAAG

Flanking Amino Acid:

VAVRGAGHITVFGLSNKFDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

57.3

47.1

Major BPS

62.6

0.31

59.1

37.6

Major PPT

80.3

0.68

79.2

38.4

Minor 5ss

33.7

-1.9

3.2

40.5

45.4

Minor BPS

47.4

-0.3

59.29

43.1

Associated Gene:

Gene:

CHIC1

Ensembl Gene ID:

ENSAPLG00000003475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009426

16065536 - 16084248

18713

ENSAPLT00000003549

16065536 - 16083498

17963