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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16072546_16079247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16072546 - 16079247

Intron Length:

6702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTCCTCTGAAGT

Flanking Amino Acid:

TEFPSVLTGKVAPEEFKTSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

69.8

0.49

37.5

Major PPT

78.7

0.65

0.9

72.4

37.7

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

54.7

0.22

1.8

73.74

43.1

Associated Gene:

Gene:

CHIC1

Ensembl Gene ID:

ENSAPLG00000003475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009426

16065536 - 16084248

18713

ENSAPLT00000003549

16065536 - 16083498

17963