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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16079404_16083098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16079404 - 16083098

Intron Length:

3695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

ACTTACTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCTGACTTACTT

Flanking Amino Acid:

LWPVVCLNKRTRRSIQKLLE

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

0.61

0.8

74.1

35.7

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

52.4

0.15

1.9

72.18

45.2

Associated Gene:

Gene:

CHIC1

Ensembl Gene ID:

ENSAPLG00000003475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037357

16065499 - 16083498

18000

ENSAPLT00000009426

16065536 - 16084248

18713

ENSAPLT00000003549

16065536 - 16083498

17963