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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16083445_16084197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16083445 - 16084197

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CCTCCTTCAACA

Flanking Amino Acid:

KCETSNMMEYVILIEFLPKY

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.5

0.53

0.8

68.9

30.1

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

57.8

0.24

1.6

64.68

Associated Gene:

Gene:

CHIC1

Ensembl Gene ID:

ENSAPLG00000003475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009426

16065536 - 16084248

18713