Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_16111138_16113091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16111138 - 16113091

Intron Length:

1954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCCAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCTGCCTCACTT

Flanking Amino Acid:

DRTPTTSEYNNDDERYRYYS

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

70.2

0.45

71.1

27.5

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

47.5

-0.1

1.9

63.16

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008908

16091300 - 16115998

24699