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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16217623_16221767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16217623 - 16221767

Intron Length:

4145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAC

U12 Branch Point Sequence:

TCTGTTTTGACC

Flanking Amino Acid:

VNEHYFGLVNFGNTCYCNSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

49.5

-0

1.1

58.7

36.3

Major PPT

71.2

0.48

1.1

44.2

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

61.9

0.36

1.4

68.18

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029801

16205521 - 16223698

18178

ENSAPLT00000008685

16205521 - 16233411

27891