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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16259171_16260060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16259171 - 16260060

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCAG

5'SS Class:

major

3'SS Sequence:

CTTTTCCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

CCGTGCCTAACA

Flanking Amino Acid:

PPPLNILTPYRDDKKDGLKF

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

56.5

44.1

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

81.6

0.71

0.7

73.7

31.3

Minor 5ss

23.3

-3.1

3.2

28.1

44.1

Minor BPS

48.3

-0.1

2.1

59.33

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008426

16256779 - 16261307

4529