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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16307808_16309566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16307808 - 16309566

Intron Length:

1759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AGTACTCTAATT

Flanking Amino Acid:

MRDNNLLGTPGAESAEDVSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

0.77

0.8

79.8

32.1

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

55.9

0.26

1.7

72.8

Associated Gene:

Gene:

RLIM

Ensembl Gene ID:

ENSAPLG00000007884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008184

16306276 - 16309735

3460