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Intron Name: Anas_platyrhynchos_platyrhynchos_10_165019_167000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

165019 - 167000

Intron Length:

1982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGGATG

5'SS Class:

major

3'SS Sequence:

CACTTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TGATACTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

64.3

47.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

73.6

0.53

0.9

69.3

35.3

Minor 5ss

-1.8

3.5

39.4

46.3

Minor BPS

0.45

1.8

79.16

42.2

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034776

164545 - 173502

8958