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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16540578_16542570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16540578 - 16542570

Intron Length:

1993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAC

U12 Branch Point Sequence:

TGCTGCTGAGCC

Flanking Amino Acid:

YTECTVTTPTGYKYEGVKFE

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.3

44.3

Major BPS

58.2

0.2

1.1

61.4

34.4

Major PPT

0.88

0.6

88.7

20.6

Minor 5ss

-2.2

3.3

40.6

45.6

Minor BPS

46.9

-0.2

2.1

60.02

44.8

Associated Gene:

Gene:

UPRT

Ensembl Gene ID:

ENSAPLG00000008794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048520

16530583 - 16544740

14158

ENSAPLT00000009146

16530583 - 16545378

14796