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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16560457_16561880_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
16560457 - 16561880

Intron Length:
1424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTAAT

5'SS Class:
strong_major

3'SS Sequence:
TCTTTGTATGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
ATTTTTATATCT

Flanking Amino Acid:
KKLWLLPIASSQGDGHFFPM

Intron Amino Acid Position:
282

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98.8
1.15
0.6
96.1
12.1

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
81.6
0.71
0.9
77
36.2

Minor 5ss
37.4
-1.4
2.8
50.6
45.9

Minor BPS
55.3
0.24
1.8
78.65
37.7

Associated Gene:

Gene:
ZDHHC15

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16554388 - 16574788
20401