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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16725872_16731513_R

Intron Information:

Intron Rank:

147427

Intron Class:

major

Intron Phase:

Intron Coordinates:

16725872 - 16731513

Intron Length:

5642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

GATTACCCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.5

40.6

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

81.1

0.7

0.8

76.5

32.1

Minor 5ss

37.7

-1.4

50.6

39.9

Minor BPS

43.7

-0.4

2.2

64.63

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037474

16725343 - 16767659

42317

ENSAPLT00000024845

16725343 - 16767659

42317