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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_16745509_16767586_R

Intron Information:

Intron Rank:
147429
Intron Class:
major
Intron Phase:
Intron Coordinates:
16745509 - 16767586
Intron Length:
22078

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CGG|GTGAGGGAT
5'SS Class:
major
3'SS Sequence:
GTTCGTATTGCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
GGATGATTTACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77
0.64
1
69.1
37.5
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
76.9
0.61
0.9
70
40.2
Minor 5ss
25
-2.9
3.4
28.9
43.6
Minor BPS
45.2
-0.3
2.3
63.98
45.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026649
Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024845
16725343 - 16767659
42317