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Intron Name: Anas_platyrhynchos_platyrhynchos_10_167856_172295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

167856 - 172295

Intron Length:

4440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTGCATATTT

Flanking Amino Acid:

CKLQGAPRESSSADQVTVHF

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.1

0.83

0.8

81.5

34.2

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

50.9

0.11

2.2

80.67

41.5

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034776

164545 - 173502

8958

ENSAPLT00000018593

167345 - 175518

8174

ENSAPLT00000005100

167192 - 173502

6311