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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16815188_16822511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16815188 - 16822511

Intron Length:

7324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

EIFNKALVDPGPDFVVCDEG

Intron Amino Acid Position:

1575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.9

0.78

0.7

77.9

36.1

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

ATRX

Ensembl Gene ID:

ENSAPLG00000006382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006696

16788325 - 16867249

78925