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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16823038_16833342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16823038 - 16833342

Intron Length:

10305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGCAT

U12 Branch Point Sequence:

TAGTTTGGCATT

Flanking Amino Acid:

HCMGLGKTLQVVSFLHTVLL

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

59.9

0.25

1.5

71.4

45.1

Major PPT

83.1

0.75

0.8

31.6

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

38.8

-0.8

2.2

56.53

Associated Gene:

Gene:

ATRX

Ensembl Gene ID:

ENSAPLG00000006382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006696

16788325 - 16867249

78925