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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16860040_16866169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16860040 - 16866169

Intron Length:

6130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

ACCTGTATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GTTTCCCCAATT

Flanking Amino Acid:

PPALSKNKTIGCTVCHSMFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

68.4

0.41

0.9

61.1

38.4

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

0.42

1.9

82.25

38.9

Associated Gene:

Gene:

ATRX

Ensembl Gene ID:

ENSAPLG00000006382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006696

16788325 - 16867249

78925