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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16888695_16890179_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

16888695 - 16890179

Intron Length:

1485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

ACAGTGTCCGTAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTAGCCTTAAAC

Flanking Amino Acid:

VAETHIVLLFNGGVTLGMVL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

52.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

57.8

0.18

0.9

50.8

38.5

Minor 5ss

91.5

1.4

0.9

86.1

Minor BPS

0.64

1.5

76.77

38.9

Associated Gene:

Gene:

MAGT1

Ensembl Gene ID:

ENSAPLG00000007136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040347

16886298 - 16897354

11057

ENSAPLT00000007427

16885242 - 16897354

12113