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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16892744_16893052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16892744 - 16893052

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

AAAACCTTACAG

Flanking Amino Acid:

NKTGWAFAALCFVLAMTSGQ

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

66.3

0.41

37.5

Major PPT

0.99

0.5

92.6

17.2

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

47.8

-0.3

1.8

50.5

42.7

Associated Gene:

Gene:

MAGT1

Ensembl Gene ID:

ENSAPLG00000007136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040347

16886298 - 16897354

11057

ENSAPLT00000007427

16885242 - 16897354

12113