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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16893194_16893822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16893194 - 16893822

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GATCTTTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTGAGGTAAAAT

Flanking Amino Acid:

RWVADRTDVNIRVIRPPNYA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.8

38.2

Major BPS

72.5

0.56

1.2

63.4

Major PPT

70.3

0.46

65.7

40.6

Minor 5ss

35.4

-1.7

3.2

46.3

42.1

Minor BPS

39.6

-0.7

2.6

61.4

Associated Gene:

Gene:

MAGT1

Ensembl Gene ID:

ENSAPLG00000007136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040347

16886298 - 16897354

11057

ENSAPLT00000007427

16885242 - 16897354

12113