Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_16924446_16924614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16924446 - 16924614

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

TGTTCGTTGAAT

Flanking Amino Acid:

GGEPLEMAHKVKVVVFDKTG

Intron Amino Acid Position:

1038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

58.4

0.21

1.2

38.7

Major PPT

79.8

0.67

0.9

36.8

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

58.2

0.34

2.2

81.3

40.2

Associated Gene:

Gene:

ATP7A

Ensembl Gene ID:

ENSAPLG00000007317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007640

16900420 - 16929316

28897