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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16937914_16940045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16937914 - 16940045

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AGTATTTAAACT

Flanking Amino Acid:

VDVKGKRVVMRVDFNVPMKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

81.6

0.78

0.8

24.9

Major PPT

85.1

0.79

0.7

84.5

30.4

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

54.5

0.22

1.7

71.19

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018137

16937711 - 16948103

10393

ENSAPLT00000008748

16937711 - 16949696

11986