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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16946742_16947444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16946742 - 16947444

Intron Length:

703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TATATCTGAATT

Flanking Amino Acid:

VASGIPAGWMGLDCGPESVK

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

74.9

36.2

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

81.9

0.72

0.9

81.2

36.5

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

64.6

0.54

1.4

78.74

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018137

16937711 - 16948103

10393

ENSAPLT00000008748

16937711 - 16949696

11986