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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16947623_16947876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16947623 - 16947876

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCTGTCTCATT

Flanking Amino Acid:

VTGKGCITIIGGGDTATCCA

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.8

0.65

0.9

72.2

37.9

Minor 5ss

34.1

-1.8

3.3

45.5

44.6

Minor BPS

43.9

-0.4

2.3

67.5

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018137

16937711 - 16948103

10393

ENSAPLT00000008748

16937711 - 16949696

11986