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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16979958_16985514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16979958 - 16985514

Intron Length:

5557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

CTCGGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

ATGACTTTGACA

Flanking Amino Acid:

YQHPPEYGSVRQNPDVQLQL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

75.3

40.8

Major BPS

74.1

0.6

66.7

39.9

Major PPT

77.5

0.62

0.9

68.2

42.3

Minor 5ss

39.7

-1.2

2.8

49.5

46.5

Minor BPS

0.47

1.3

69.08

37.2

Associated Gene:

Gene:

AMOT

Ensembl Gene ID:

ENSAPLG00000008840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031691

16972079 - 17012603

40525

ENSAPLT00000009220

16963983 - 17012603

48621