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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16985966_16987811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16985966 - 16987811

Intron Length:

1846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCACCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCACTTTCACC

Flanking Amino Acid:

CYEKVARLQKLETEIQQVSE

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

86.9

30.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

73.2

0.52

0.9

33.3

Minor 5ss

34.8

-1.7

3.2

50.1

46.4

Minor BPS

59.5

0.28

1.8

70.49

41.3

Associated Gene:

Gene:

AMOT

Ensembl Gene ID:

ENSAPLG00000008840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031691

16972079 - 17012603

40525

ENSAPLT00000009220

16963983 - 17012603

48621