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Intron Name: Anas_platyrhynchos_platyrhynchos_10_16992270_17001471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16992270 - 17001471

Intron Length:

9202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

CCTTACCTAACT

Flanking Amino Acid:

QAKVVKLEEELKKKQVYVEK

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

0.37

1.3

Major PPT

85.6

0.8

83.6

31.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

59.2

0.37

1.9

77.62

44.4

Associated Gene:

Gene:

AMOT

Ensembl Gene ID:

ENSAPLG00000008840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031691

16972079 - 17012603

40525

ENSAPLT00000009220

16963983 - 17012603

48621