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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17003652_17005826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17003652 - 17005826

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TGGTCCTTCATC

Flanking Amino Acid:

LDAAATVAAQRDTTVISHSP

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

80.3

0.68

0.8

72.6

37.6

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

63.8

0.42

1.8

70.79

Associated Gene:

Gene:

AMOT

Ensembl Gene ID:

ENSAPLG00000008840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031691

16972079 - 17012603

40525

ENSAPLT00000009220

16963983 - 17012603

48621