Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_1700682_1700777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1700682 - 1700777

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGCG

5'SS Class:

major

3'SS Sequence:

CCTTCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

ACCCCAATAAAC

Flanking Amino Acid:

TTVTAYQNQQITKLKIDRNP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

51.7

45.5

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

75.4

0.57

0.7

69.3

24.5

Minor 5ss

41.1

-1

3.4

56.7

47.5

Minor BPS

43.5

-0.5

1.9

50.02

39.6

Associated Gene:

Gene:

TBX22

Ensembl Gene ID:

ENSAPLG00000010929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036357

1698405 - 1704062

5658

ENSAPLT00000011374

1699484 - 1704062

4579