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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17108586_17111454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17108586 - 17111454

Intron Length:

2869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TGACAGTGAACT

Flanking Amino Acid:

VEWLILPWVLGFIWGEIKEM

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

92.4

0.95

0.6

88.6

20.8

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

44.9

-0.3

2.3

65.75

43.6

Associated Gene:

Gene:

TRPC5

Ensembl Gene ID:

ENSAPLG00000009198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009595

17076437 - 17139805

63369