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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17160912_17161256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17160912 - 17161256

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTATCT

5'SS Class:

major

3'SS Sequence:

GATTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTGTAATGAATG

Flanking Amino Acid:

GVASYSYPQKVMVNSAVISN

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

37.9

Major BPS

67.7

0.44

38.9

Major PPT

0.74

0.9

36.8

Minor 5ss

39.3

-1.2

3.3

57.4

46.8

Minor BPS

45.6

-0.4

1.9

51.6

42.4

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027705

17151658 - 17176155

24498

ENSAPLT00000010363

17151658 - 17176155

24498